RECOMB
2012
Springer
11 years 7 months ago
2012
Springer
Abstract. Since the first emergence of protein-protein interaction networks, more than a decade ago, they have been viewed as static scaffolds of the signaling-regulatory events ...
NAR
2011
12 years 7 months ago
2011
Domain Interaction MAp (DIMA, available at http:// webclu.bio.wzw.tum.de/dima) is a database of predicted and known interactions between protein domains. It integrates 5807 struct...
NAR
2011
12 years 7 months ago
2011
The Phospho.ELM resource (http://phospho.elm.eu .org) is a relational database designed to store in vivo and in vitro phosphorylation data extracted from the scientific literature...
NAR
2011
12 years 7 months ago
2011
P2CS (http://www.p2cs.org) is a specialized database for prokaryotic two-component systems (TCSs), virtually ubiquitous signalling proteins which regulate a wide range of physiolo...
BCB
2010
12 years 11 months ago
2010
Markov Clustering (MCL) is a popular algorithm for clustering networks in bioinformatics such as protein-protein interaction networks and protein similarity networks. An important...
IJBRA
2010
13 years 3 months ago
2010
—Accumulating evidence suggests that biological systems exhibit modular organization. Accurate identification of modularity is vital for understanding this organization. A recen...
EXPERT
2002
13 years 4 months ago
2002
names in the same abstract already indicates a relation between them. Because of its simplicity, we can apply this approach to large amounts of text and establish interaction netwo...
CORR
2004
Springer
13 years 4 months ago
2004
Springer
We define the concept of dependence among multiple variables using maximum entropy techniques and introduce a graphical notation to denote the dependencies. Direct inference of in...
BIB
2005
13 years 4 months ago
2005
The Biomolecular Interaction Network Database (BIND) (http://bind.ca) archives biomolecular interaction, reaction, complex and pathway information. Our aim is to curate the detail...
BMCBI
2006
13 years 4 months ago
2006
Background: Structural analysis of cellular interaction networks contributes to a deeper understanding of network-wide interdependencies, causal relationships, and basic functiona...