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IPPS
2006
IEEE
13 years 10 months ago
Simulating and optimizing a peer-to-peer computing framework
The aim of P2P computing is to build virtual computing systems dedicated to large-scale computational problems. JXTA1 proposes an underlying infrastructure on which JNGI2 , one of...
Jean-Baptiste Ernst-Desmulier, Julien Bourgeois, M...
IPPS
2006
IEEE
13 years 10 months ago
Automatic application-specific microarchitecture reconfiguration
Applications for constrained embedded systems are subject to strict time constraints and restrictive resource utilization. With soft core processors, application developers can cu...
Shobana Padmanabhan, Ron K. Cytron, Roger D. Chamb...
IPPS
2006
IEEE
13 years 10 months ago
Multisite co-allocation algorithms for computational grid
Efficient multisite job scheduling facilitates the cooperation of multi-domain massively parallel processor systems in a computing grid environment. However, co-allocation, hetero...
Weizhe Zhang, A. M. K. Cheng, Mingzeng Hu
IPPS
2006
IEEE
13 years 10 months ago
MT-ClustalW: multithreading multiple sequence alignment
ClustalW is the most widely used tool for aligning multiple protein or nucleotide sequences. The alignment is achieved via three stages: pairwise alignment, guide tree generation ...
K. Chaichoompu, Surin Kittitornkun, Sissades Tongs...
IPPS
2006
IEEE
13 years 10 months ago
Cooperative load balancing for a network of heterogeneous computers
In this paper we present a game theoretic approach to solve the static load balancing problem in a distributed system which consists of heterogeneous computers connected by a sing...
Satish Penmatsa, Anthony T. Chronopoulos
IPPS
2006
IEEE
13 years 10 months ago
Load balancing in the presence of random node failure and recovery
In many distributed computing systems that are prone to either induced or spontaneous node failures, the number of available computing resources is dynamically changing in a rando...
Sagar Dhakal, Majeed M. Hayat, Jorge E. Pezoa, Cha...
IPPS
2006
IEEE
13 years 10 months ago
Tree-based overlay networks for scalable applications
The increasing availability of high-performance computing systems with thousands, tens of thousands, and even hundreds of thousands of computational nodes is driving the demand fo...
Dorian C. Arnold, G. D. Pack, Barton P. Miller
IPPS
2006
IEEE
13 years 10 months ago
A method to improve structural modeling based on conserved domain clusters
—Homology modeling requires an accurate alignment between a query sequence and its homologs with known three-dimensional (3D) information. Current structural modeling techniques ...
Fa Zhang, Lin Xu, Bo Yuan