Sciweavers

RECOMB
2010
Springer
13 years 12 months ago
Genomic DNA k-mer Spectra: Models and Modalities
Background: The empirical frequencies of DNA k-mers in whole genome sequences provide an interesting perspective on genomic complexity, and the availability of large segments of g...
Benny Chor, David Horn, Nick Goldman, Yaron Levy, ...
RECOMB
2010
Springer
13 years 12 months ago
Alignment-Free Phylogenetic Reconstruction
We introduce the first polynomial-time phylogenetic reconstruction algorithm under a model of sequence evolution allowing insertions and deletions—or indels. Given appropriate ...
Constantinos Daskalakis, Sébastien Roch
RECOMB
2010
Springer
13 years 12 months ago
A Novel Abundance-Based Algorithm for Binning Metagenomic Sequences Using l-Tuples
Abstract. Metagenomics is the study of microbial communities sampled directly from their natural environment, without prior culturing. Among the computational tools recently develo...
Yu-Wei Wu, Yuzhen Ye
RECOMB
2010
Springer
13 years 12 months ago
Seed Design Framework for Mapping SOLiD Reads
Laurent Noé, Marta Gîrdea, Gregory Ku...
RECOMB
2010
Springer
13 years 12 months ago
Inference of Isoforms from Short Sequence Reads
Jianxing Feng, Wei Li, Tao Jiang
RECOMB
2010
Springer
13 years 12 months ago
IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler
Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis ...
RECOMB
2010
Springer
13 years 12 months ago
The Clark Phase-able Sample Size Problem: Long-Range Phasing and Loss of Heterozygosity in GWAS
A phase transition is taking place today. The amount of data generated by genome resequencing technologies is so large that in some cases it is now less expensive to repeat the exp...
Bjarni V. Halldórsson, Derek Aguiar, Ryan T...