RECOMB
2010
Springer
13 years 3 months ago
2010
Springer
We consider the following problem: given a forest of gene family trees on a set of genomes, find a first speciation which splits these genomes into two subsets and minimizes the ...
RECOMB
2010
Springer
13 years 3 months ago
2010
Springer
Abstract. We describe a probabilistic model, implemented as a dynamic Bayesian network, that can be used to predict nucleosome positioning along a chromosome based on one or more g...
RECOMB
2010
Springer
13 years 3 months ago
2010
Springer
RECOMB
2010
Springer
13 years 3 months ago
2010
Springer
We study two problems in the double cut and join (DCJ) model: sorting – transforming one multilinear genome into another and halving – transforming a duplicated genome into a p...
RECOMB
2010
Springer
13 years 3 months ago
2010
Springer
Abstract. In a horizontal gene transfer (HGT) event a gene is transferred between two species that do not share an ancestor-descendant relationship. Typically, no more than a few g...
RECOMB
2010
Springer
13 years 6 months ago
2010
Springer
Abstract. Emerging research demonstrates the potential of proteinprotein interaction (PPI) networks in uncovering the mechanistic bases of cancers, through identification of intera...
RECOMB
2010
Springer
13 years 6 months ago
2010
Springer
Immense amounts of raw instrument data (i.e., images of fluorescence) are currently being generated using ultra high-throughput sequencing platforms. An important computational cha...
RECOMB
2010
Springer
13 years 6 months ago
2010
Springer
Abstract. Recent genome sequencing studies have shown that the somatic mutations that drive cancer development are distributed across a large number of genes. This mutational heter...
RECOMB
2010
Springer
13 years 6 months ago
2010
Springer
In this work we consider an inference task that biologists are very good at: deciphering biological processes by bringing together knowledge that has been obtained by experiments u...
RECOMB
2010
Springer
13 years 6 months ago
2010
Springer