Current methods for interpreting oligonucleotidebased SNP-detection microarrays, SNP chips, are based on statistics and require extensive parameter tuning as well as extremely hig...
Michael Molla, Jude W. Shavlik, Thomas Albert, Tod...
RNA genes lack most of the signals used for protein gene identification. A major shortcoming of previous discriminative methods to distinguish functional RNA (fRNA) genes from oth...
Richard F. Meraz, Xiaofeng He, Chris H. Q. Ding, S...
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...
In philosophy, the term ontology has been used since the 17th century to refer both to a philosophical discipline (Ontology with a capital "O"), and as a domain-independe...
Phylogenetic trees are commonly reconstructed based on hard optimization problems such as maximum parsimony (MP) and maximum likelihood (ML). Conventional MP heuristics for produc...
Usman Roshan, Bernard M. E. Moret, Tandy Warnow, T...