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BMCBI
2006
138views more  BMCBI 2006»
14 years 10 months ago
Determination of strongly overlapping signaling activity from microarray data
Background: As numerous diseases involve errors in signal transduction, modern therapeutics often target proteins involved in cellular signaling. Interpretation of the activity of...
Ghislain Bidaut, Karsten Suhre, Jean-Michel Claver...
111
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BMCBI
2002
109views more  BMCBI 2002»
14 years 10 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
TCBB
2010
136views more  TCBB 2010»
14 years 8 months ago
Efficient Extraction of Protein-Protein Interactions from Full-Text Articles
—Proteins and their interactions govern virtually all cellular processes, such as regulation, signaling, metabolism, and structure. Most experimental findings pertaining to such ...
Jörg Hakenberg, Robert Leaman, Nguyen Ha Vo, ...
72
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KDD
2002
ACM
140views Data Mining» more  KDD 2002»
15 years 10 months ago
Mining frequent item sets by opportunistic projection
In this paper, we present a novel algorithm OpportuneProject for mining complete set of frequent item sets by projecting databases to grow a frequent item set tree. Our algorithm ...
Junqiang Liu, Yunhe Pan, Ke Wang, Jiawei Han
SIGMOD
2004
ACM
162views Database» more  SIGMOD 2004»
15 years 10 months ago
Graph Indexing: A Frequent Structure-based Approach
Graph has become increasingly important in modelling complicated structures and schemaless data such as proteins, chemical compounds, and XML documents. Given a graph query, it is...
Xifeng Yan, Philip S. Yu, Jiawei Han