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» A 3D pattern matching algorithm for DNA sequences
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BIRD
2007
Springer
15 years 6 months ago
Fast Search Algorithms for Position Specific Scoring Matrices
Fast search algorithms for finding good instances of patterns given as position specific scoring matrices are developed, and some empirical results on their performance on DNA sequ...
Cinzia Pizzi, Pasi Rastas, Esko Ukkonen
WABI
2004
Springer
15 years 7 months ago
A Polynomial-Time Algorithm for the Matching of Crossing Contact-Map Patterns
Abstract. Contact maps are a model to capture the core information in the structure of biological molecules, e.g., proteins. A contact map consists of an ordered set ¡ of elements...
Jens Gramm
ICASSP
2007
IEEE
15 years 5 months ago
Adaptive Multi-Pattern Fast Block-Matching Algorithm Based on Motion Classification Techniques
Motion estimation is the most time-consuming subsystem in a video codec. Thus, more efficient methods of motion estimation should be investigated. Real video sequences usually exh...
Iván González-Díaz, Manuel de...
IBPRIA
2007
Springer
15 years 3 months ago
Segmentation of Rigid Motion from Non-rigid 2D Trajectories
Abstract. In this paper we evaluate an automatic segmentation algorithm able to identify the set of rigidly moving points within a deformable object given the 2D measurements acqui...
Alessio Del Bue, Xavier Lladó, Lourdes de A...
EVOW
2004
Springer
15 years 5 months ago
Evolving Regular Expression-Based Sequence Classifiers for Protein Nuclear Localisation
A number of bioinformatics tools use regular expression (RE) matching to locate protein or DNA sequence motifs that have been discovered by researchers in the laboratory. For exam...
Amine Heddad, Markus Brameier, Robert M. MacCallum