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» A 3D pattern matching algorithm for DNA sequences
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SAC
2010
ACM
15 years 2 months ago
FANGS: high speed sequence mapping for next generation sequencers
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
Sanchit Misra, Ramanathan Narayanan, Simon Lin, Al...
CSB
2003
IEEE
113views Bioinformatics» more  CSB 2003»
15 years 7 months ago
An Optimal DNA Segmentation Based on the MDL Principle
: The biological world is highly stochastic and inhomogeneous in its behaviour. There are regions in DNA with high concentration of G or C bases; stretches of sequences with an abu...
Wojciech Szpankowski, Wenhui Ren, Lukasz Szpankows...
ICCV
2007
IEEE
16 years 3 months ago
A Variational Method for Scene Flow Estimation from Stereo Sequences
This paper presents a method for scene flow estimation from a calibrated stereo image sequence. The scene flow contains the 3-D displacement field of scene points, so that the 2-D...
Frederik Huguet, Frederic Devernay
CVPR
2009
IEEE
16 years 9 months ago
Discriminative Subvolume Search for Efficient Action Detection
Actions are spatio-temporal patterns which can be characterized by collections of spatio-temporal invariant features. Detection of actions is to find the re-occurrences (e.g. th...
Junsong Yuan (Northwestern University), Zicheng Li...
APBC
2008
231views Bioinformatics» more  APBC 2008»
15 years 3 months ago
Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency
: Finding motifs and the corresponding binding sites is a critical and challenging problem in studying the process of gene expression. String and matrix representations are two pop...
Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Si...