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» A 3D pattern matching algorithm for DNA sequences
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ICPR
2008
IEEE
16 years 3 months ago
Hand motion expertise analysis using dynamic hierarchical activity modeling and isomap
Several domains such as sports, surgery, dance etc. are characterized by a significant influence of expertise of the performer on the motion pattern and style. The retrieval of ex...
Kanav Kahol, Mithra Vankipuram
115
Voted
WABI
2009
Springer
132views Bioinformatics» more  WABI 2009»
15 years 8 months ago
mpscan: Fast Localisation of Multiple Reads in Genomes
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...
Eric Rivals, Leena Salmela, Petteri Kiiskinen, Pet...
FUIN
2008
80views more  FUIN 2008»
15 years 1 months ago
External Memory Algorithms for String Problems
In this paper we present external memory algorithms for some string problems. External memory algorithms have been developed in many research areas, as the speed gap between fast ...
Kangho Roh, Maxime Crochemore, Costas S. Iliopoulo...
138
Voted
BMCBI
2007
174views more  BMCBI 2007»
15 years 1 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...
93
Voted
WABI
2004
Springer
15 years 7 months ago
Finding Optimal Pairs of Patterns
We consider the problem of finding the optimal pair of string patterns for discriminating between two sets of strings, i.e. finding the pair of patterns that is best with respect...
Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, ...