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» A 3D pattern matching algorithm for DNA sequences
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BMCBI
2007
116views more  BMCBI 2007»
15 years 1 months ago
MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes
Background: Despite a remarkable success in the computational prediction of genes in Bacteria and Archaea, a lack of comprehensive understanding of prokaryotic gene structures pre...
Huaiqiu Zhu, Gang-Qing Hu, Yi-Fan Yang, Jin Wang, ...
JSS
2007
120views more  JSS 2007»
15 years 1 months ago
The design and evaluation of path matching schemes on compressed control flow traces
A control flow trace captures the complete sequence of dynamically executed basic blocks and function calls. It is usually of very large size and therefore commonly stored in com...
Yongjing Lin, Youtao Zhang, Rajiv Gupta
GECCO
2007
Springer
190views Optimization» more  GECCO 2007»
15 years 8 months ago
Analysis of evolutionary algorithms for the longest common subsequence problem
In the longest common subsequence problem the task is to find the longest sequence of letters that can be found as subsequence in all members of a given finite set of sequences....
Thomas Jansen, Dennis Weyland
CIBCB
2005
IEEE
15 years 3 months ago
A Transcriptional Approach to Gene Clustering
— We present an integrative method for clustering coregulated genes and elucidating their underlying regulatory mechanisms. We use multi-state partition functions and thermodynam...
Ilias Tagkopoulos
NGC
2007
Springer
150views Communications» more  NGC 2007»
15 years 1 months ago
Exploiting Temporal Relations in Mining Hepatitis Data
Various data mining methods have been developed last few years for hepatitis study using a large temporal and relational database given to the research community. In this work we i...
Tu Bao Ho, Canh Hao Nguyen, Saori Kawasaki, Si Qua...