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» A 3D pattern matching algorithm for DNA sequences
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FSTTCS
2000
Springer
15 years 3 months ago
Text Sparsification via Local Maxima
In this paper we investigate some properties and algorithms related to a text sparsification technique based on the identification of local maxima in the given string. As the numb...
Pierluigi Crescenzi, Alberto Del Lungo, Roberto Gr...
VIP
2001
15 years 1 months ago
Enhancing Screen Teleconferencing with Streaming SIMD Extensions
It is often necessary to reduce storage and bandwidth requirements when recording or broadcasting a sequence of actions on a computer screen. These applications most commonly fall...
John G. Allen, Jesse S. Jin
FCT
2005
Springer
15 years 5 months ago
Fully Incremental LCS Computation
Sequence comparison is a fundamental task in pattern matching. Its applications include file comparison, spelling correction, information retrieval, and computing (dis)similaritie...
Yusuke Ishida, Shunsuke Inenaga, Ayumi Shinohara, ...
BMCBI
2004
146views more  BMCBI 2004»
14 years 11 months ago
Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
JCB
2007
136views more  JCB 2007»
14 years 11 months ago
A Structure-Based Flexible Search Method for Motifs in RNA
The discovery of non-coding RNA (ncRNA) motifs and their role in regulating gene expression has recently attracted considerable attention. The goal is to discover these motifs in ...
Isana Veksler-Lublinsky, Michal Ziv-Ukelson, Danny...