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CEC
2009
IEEE
15 years 5 months ago
A Bacterial Evolutionary Algorithm for automatic data clustering
This paper describes an evolutionary clustering algorithm, which can partition a given dataset automatically into the optimal number of groups through one shot of optimization. The...
Swagatam Das, Archana Chowdhury, Ajith Abraham
CIBCB
2007
IEEE
15 years 4 days ago
Optimization of Bacterial Strains with Variable-Sized Evolutionary Algorithms
—In metabolic engineering it is difficult to identify which set of genetic manipulations will result in a microbial strain that achieves a desired production goal, due to the co...
Miguel Rocha, José P. Pinto, Isabel Rocha, ...
BMCBI
2008
132views more  BMCBI 2008»
14 years 10 months ago
The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes thr
Background: Data mining in large DNA sequences is a major challenge in microbial genomics and bioinformatics. Oligonucleotide usage (OU) patterns provide a wealth of information f...
Hamilton Ganesan, Anna S. Rakitianskaia, Colin F. ...
EPIA
2007
Springer
15 years 4 months ago
Evaluating Simulated Annealing Algorithms in the Optimization of Bacterial Strains
Abstract. In this work, a Simulated Annealing (SA) algorithm is proposed for a Metabolic Engineering task: the optimization of the set of gene deletions to apply to a microbial str...
Miguel Rocha, Rui Mendes, Paulo Maia, José ...
GECCO
2003
Springer
15 years 3 months ago
Mining Comprehensible Clustering Rules with an Evolutionary Algorithm
In this paper, we present a novel evolutionary algorithm, called NOCEA, which is suitable for Data Mining (DM) clustering applications. NOCEA evolves individuals that consist of a ...
Ioannis A. Sarafis, Philip W. Trinder, Ali M. S. Z...