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» A Bayesian Approach to Model Checking Biological Systems
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ESOP
2005
Springer
15 years 5 months ago
A Type System Equivalent to a Model Checker
ite-state abstraction scheme such as predicate abstraction. The type system, which is also parametric, type checks exactly those programs that are accepted by the model checker. It...
Mayur Naik, Jens Palsberg
BMCBI
2005
122views more  BMCBI 2005»
14 years 11 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...
ENTCS
2008
110views more  ENTCS 2008»
14 years 12 months ago
An Efficient Solution for Model Checking Graph Transformation Systems
This paper presents an efficient solution for modeling checking graph transformation systems. The approach transforms AGG specifications into Bogor models and supports both attribu...
Luciano Baresi, Vahid Rafe, Adel Torkaman Rahmani,...
BMCBI
2010
91views more  BMCBI 2010»
14 years 12 months ago
Ranked retrieval of Computational Biology models
Background: The study of biological systems demands computational support. If targeting a biological problem, the reuse of existing computational models can save time and effort. ...
Ron Henkel, Lukas Endler, Andre Peters, Nicolas Le...
JIB
2006
220views more  JIB 2006»
14 years 11 months ago
An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...