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» A Bayesian Approach to Model Checking Biological Systems
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AAAI
2011
13 years 11 months ago
Global Seismic Monitoring: A Bayesian Approach
The automated processing of multiple seismic signals to detect and localize seismic events is a central tool in both geophysics and nuclear treaty verification. This paper report...
Nimar S. Arora, Stuart Russell, Paul Kidwell, Erik...
ECCB
2008
IEEE
14 years 12 months ago
Temporal logic patterns for querying dynamic models of cellular interaction networks
Abstract: Models of the dynamics of cellular interaction networks have become increasingly larger in recent years. Formal verification based on model checking provides a powerful t...
Pedro T. Monteiro, Delphine Ropers, Radu Mateescu,...
FM
2009
Springer
138views Formal Methods» more  FM 2009»
15 years 6 months ago
What Can Formal Methods Bring to Systems Biology?
This position paper argues that the operational modelling approaches from the formal methods community can be applied fruitfully within the systems biology domain. The results can ...
Nicola Bonzanni, K. Anton Feenstra, Wan Fokkink, E...
IWSSD
2000
IEEE
15 years 4 months ago
Model Checking Implicit-Invocation Systems
While implicit invocation (publish-subscribe) systems have goodengineering properties, they are difficult toreason about and to test. Model checking such systems is an attractive...
David Garlan, Serge Khersonsky
BMCBI
2006
194views more  BMCBI 2006»
14 years 12 months ago
Novel metaheuristic for parameter estimation in nonlinear dynamic biological systems
Background: We consider the problem of parameter estimation (model calibration) in nonlinear dynamic models of biological systems. Due to the frequent ill-conditioning and multi-m...
Maria Rodriguez-Fernandez, Jose A. Egea, Julio R. ...