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» A Better Mythology for System Design
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ISMB
1996
15 years 2 months ago
Refining Neural Network Predictions for Helical Transmembrane Proteins by Dynamic Programming
For transmembrane proteins experimental determina-tion of three-dimensional structure is problematic. However, membrane proteins have important impact for molecular biology in gen...
Burkhard Rost, Rita Casadio, Piero Fariselli
BMCBI
2010
193views more  BMCBI 2010»
15 years 1 months ago
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
Background: Mass spectrometry (MS) coupled with online separation methods is commonly applied for differential and quantitative profiling of biological samples in metabolomic as w...
Tomás Pluskal, Sandra Castillo, Alejandro V...
BMCBI
2006
128views more  BMCBI 2006»
15 years 1 months ago
Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it
Background: The proliferation of data repositories in bioinformatics has resulted in the development of numerous interfaces that allow scientists to browse, search and analyse the...
Kevin L. Garwood, Christopher Garwood, Cornelia He...
BMCBI
2005
152views more  BMCBI 2005»
15 years 1 months ago
GeneKeyDB: A lightweight, gene-centric, relational database to support data mining environments
Background: The analysis of biological data is greatly enhanced by existing or emerging databases. Most existing databases, with few exceptions are not designed to easily support ...
S. A. Kirov, X. Peng, E. Baker, D. Schmoyer, B. Zh...
COLING
2002
15 years 1 months ago
Creating a Finite-State Parser with Application Semantics
Parsli is a finite-state (FS) parser which can be tailored to the lexicon, syntax, and semantics of a particular application using a hand-editable declarative lexicon. The lexicon...
Owen Rambow, Srinivas Bangalore, Tahir Butt, Alexi...