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BMCBI
2005
92views more  BMCBI 2005»
14 years 11 months ago
Predicting functional sites with an automated algorithm suitable for heterogeneous datasets
Background: In a previous report (La et al., Proteins, 2005), we have demonstrated that the identification of phylogenetic motifs, protein sequence fragments conserving the overal...
David La, Dennis R. Livesay
BMCBI
2005
119views more  BMCBI 2005»
14 years 11 months ago
A protein domain interaction interface database: InterPare
Background: Most proteins function by interacting with other molecules. Their interaction interfaces are highly conserved throughout evolution to avoid undesirable interactions th...
Sungsam Gong, Changbum Park, Hansol Choi, Junsu Ko...
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BMCBI
2005
86views more  BMCBI 2005»
14 years 11 months ago
WebArray: an online platform for microarray data analysis
Background: Many cutting-edge microarray analysis tools and algorithms, including commonly used limma and affy packages in Bioconductor, need sophisticated knowledge of mathematic...
Xiaoqin Xia, Michael McClelland, Yipeng Wang
JOC
2007
133views more  JOC 2007»
14 years 11 months ago
Trapdoor Hard-to-Invert Group Isomorphisms and Their Application to Password-Based Authentication
In the security chain the weakest link is definitely the human one: human beings cannot remember long secrets and often resort to rather insecure solutions to keep track of their ...
Dario Catalano, David Pointcheval, Thomas Pornin
BMCBI
2004
208views more  BMCBI 2004»
14 years 11 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein