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» A Case for Codons in Evolutionary Algorithms
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STOC
2006
ACM
129views Algorithms» more  STOC 2006»
15 years 10 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
GECCO
2008
Springer
172views Optimization» more  GECCO 2008»
14 years 11 months ago
Empirical analysis of a genetic algorithm-based stress test technique
Evolutionary testing denotes the use of evolutionary algorithms, e.g., Genetic Algorithms (GAs), to support various test automation tasks. Since evolutionary algorithms are heuris...
Vahid Garousi
NIPS
2008
14 years 11 months ago
An Empirical Analysis of Domain Adaptation Algorithms for Genomic Sequence Analysis
We study the problem of domain transfer for a supervised classification task in mRNA splicing. We consider a number of recent domain transfer methods from machine learning, includ...
Gabriele Schweikert, Christian Widmer, Bernhard Sc...
DAM
2007
153views more  DAM 2007»
14 years 9 months ago
Computing the minimum number of hybridization events for a consistent evolutionary history
It is now well-documented that the structure of evolutionary relationships between a set of present-day species is not necessarily tree-like. The reason for this is that reticulat...
Magnus Bordewich, Charles Semple
GECCO
2011
Springer
240views Optimization» more  GECCO 2011»
14 years 1 months ago
Collisions are helpful for computing unique input-output sequences
Computing unique input-output sequences (UIOs) from finite state machines (FSMs) is important for conformance testing in software engineering, where evolutionary algorithms (EAs)...
Chao Qian, Yang Yu, Zhi-Hua Zhou