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CASES
2007
ACM
15 years 1 months ago
Rethinking custom ISE identification: a new processor-agnostic method
The last decade has witnessed the emergence of the Application Specific Instruction-set Processor (ASIP) as a viable platform for embedded systems. Extensible ASIPs allow the user...
Ajay K. Verma, Philip Brisk, Paolo Ienne
SIGIR
2006
ACM
15 years 3 months ago
Thread detection in dynamic text message streams
Text message stream is a newly emerging type of Web data which is produced in enormous quantities with the popularity of Instant Messaging and Internet Relay Chat. It is benefici...
Dou Shen, Qiang Yang, Jian-Tao Sun, Zheng Chen
BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
BMCBI
2007
163views more  BMCBI 2007»
14 years 9 months ago
Strainer: software for analysis of population variation in community genomic datasets
Background: Metagenomic analyses of microbial communities that are comprehensive enough to provide multiple samples of most loci in the genomes of the dominant organism types will...
John M. Eppley, Gene W. Tyson, Wayne M. Getz, Jill...
BIOINFORMATICS
2005
93views more  BIOINFORMATICS 2005»
14 years 9 months ago
Donuts, scratches and blanks: robust model-based segmentation of microarray images
Inner holes, artifacts and blank spots are common in microarray images, but current image analysis methods do not pay them enough attention. We propose a new robust model-based me...
Qunhua Li, Chris Fraley, Roger Eugene Bumgarner, K...