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IPPS
2003
IEEE
15 years 9 months ago
Gene Clustering Using Self-Organizing Maps and Particle Swarm Optimization
Gene clustering, the process of grouping related genes in the same cluster, is at the foundation of different genomic studies that aim at analyzing the function of genes. Microarr...
Xiang Xiao, Ernst R. Dow, Russell C. Eberhart, Zin...
ACAL
2007
Springer
15 years 10 months ago
An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
Abstract. This paper illustrates how the Quadratic Assignment Problem (QAP) is used as a mathematical model that helps to produce a visualization of microarray data, based on the r...
Mario Inostroza-Ponta, Alexandre Mendes, Regina Be...
BMCBI
2008
80views more  BMCBI 2008»
15 years 4 months ago
Towards an automatic classification of protein structural domains based on structural similarity
Background: Formal classification of a large collection of protein structures aids the understanding of evolutionary relationships among them. Classifications involving manual ste...
Vichetra Sam, Chin-Hsien Tai, Jean Garnier, Jean-F...
SDM
2004
SIAM
212views Data Mining» more  SDM 2004»
15 years 5 months ago
Clustering with Bregman Divergences
A wide variety of distortion functions, such as squared Euclidean distance, Mahalanobis distance, Itakura-Saito distance and relative entropy, have been used for clustering. In th...
Arindam Banerjee, Srujana Merugu, Inderjit S. Dhil...
SAC
2009
ACM
15 years 11 months ago
A gradient oriented recombination scheme for evolution strategies
This paper proposes a novel recombination scheme for evolutionary algorithms, which can guide the new population generation towards the maximum increase of the objective function....
Haifeng Chen, Guofei Jiang