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» A Comparative Study of 2QBF Algorithms
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BMCBI
2011
14 years 8 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
RECOMB
2011
Springer
14 years 7 months ago
Rich Parameterization Improves RNA Structure Prediction
Motivation. Current approaches to RNA structure prediction range from physics-based methods, which rely on thousands of experimentally-measured thermodynamic parameters, to machin...
Shay Zakov, Yoav Goldberg, Michael Elhadad, Michal...
INFOCOM
2012
IEEE
13 years 7 months ago
CONSEL: Connectivity-based segmentation in large-scale 2D/3D sensor networks
—A cardinal prerequisite for the system design of a sensor network, is to understand the geometric environment where sensor nodes are deployed. The global topology of a largescal...
Hongbo Jiang, Tianlong Yu, Chen Tian, Guang Tan, C...
EUROCAST
2007
Springer
122views Hardware» more  EUROCAST 2007»
15 years 9 months ago
Generation of Indexes for Compiling Efficient Parsers from Formal Specifications
abstract Parsing schemata [4] provide a formal, simple and uniform way to describe, analyze and compare different parsing algorithms. The notion of a parsing schema comes from cons...
Carlos Gómez-Rodríguez, Miguel A. Al...
CP
2004
Springer
15 years 8 months ago
ID Walk: A Candidate List Strategy with a Simple Diversification Device
This paper presents a new optimization metaheuristic called ID Walk (Intensification/Diversification Walk) that offers advantages for combining simplicity with effectiveness. In ad...
Bertrand Neveu, Gilles Trombettoni, Fred Glover