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» A Comparison of Genetic Network Models
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IJCNN
2006
IEEE
15 years 3 months ago
A Comparison between Recursive Neural Networks and Graph Neural Networks
— Recursive Neural Networks (RNNs) and Graph Neural Networks (GNNs) are two connectionist models that can directly process graphs. RNNs and GNNs exploit a similar processing fram...
Vincenzo Di Massa, Gabriele Monfardini, Lorenzo Sa...
GECCO
2003
Springer
15 years 2 months ago
Identifying Structural Mechanisms in Standard Genetic Programming
This paper presents a hypothesis about an undiscovered class of mechanisms that exist in standard GP. Rather than being intentionally designed, these mechanisms would be an uninten...
Jason M. Daida, Adam M. Hilss
CMSB
2006
Springer
15 years 1 months ago
Compositional Reachability Analysis of Genetic Networks
Genetic regulatory networks have been modeled as discrete transition systems by many approaches, benefiting from a large number of formal verification algorithms available for the ...
Gregor Gößler
EVOW
2007
Springer
15 years 3 months ago
Bio-mimetic Evolutionary Reverse Engineering of Genetic Regulatory Networks
The effective reverse engineering of biochemical networks is one of the great challenges of systems biology. The contribution of this paper is two-fold: 1) We introduce a new meth...
Daniel Marbach, Claudio Mattiussi, Dario Floreano
NN
2007
Springer
267views Neural Networks» more  NN 2007»
14 years 9 months ago
Modeling of gene regulatory networks with hybrid differential evolution and particle swarm optimization
In the last decade, recurrent neural networks (RNNs) have attracted more efforts in inferring genetic regulatory networks (GRNs), using time series gene expression data from micro...
Rui Xu, Ganesh K. Venayagamoorthy, Donald C. Wunsc...