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» A Computational Approach to Binding Theory
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ICLP
2009
Springer
16 years 11 days ago
A Tabling Implementation Based on Variables with Multiple Bindings
Suspension-based tabling systems have to save and restore computation states belonging to OR branches. Stack freezing combined with (forward) trailing is among the better-known imp...
Pablo Chico de Guzmán, Manuel Carro, Manuel...
BMCBI
2006
111views more  BMCBI 2006»
14 years 11 months ago
PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
Tomer Hertz, Chen Yanover
ICPP
1998
IEEE
15 years 4 months ago
Techniques for Delayed Binding of Monitoring Mechanisms to Application-Specific Instrumentation Points
Online interaction with computer systems and applications allows developers to monitor, experiment with, and debug long-running, resource-intensive applicationsat runtime. Traditi...
Jeffrey S. Vetter, Karsten Schwan
BMCBI
2006
112views more  BMCBI 2006»
14 years 11 months ago
A correlated motif approach for finding short linear motifs from protein interaction networks
Background: An important class of interaction switches for biological circuits and disease pathways are short binding motifs. However, the biological experiments to find these bin...
Soon-Heng Tan, Hugo Willy, Wing-Kin Sung, See-Kion...
RECOMB
2008
Springer
16 years 1 days ago
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
Raluca Gordân, Leelavati Narlikar, Alexander...