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» A Data Transformation System for Biological Data Sources
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99
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EDBT
2006
ACM
137views Database» more  EDBT 2006»
16 years 2 months ago
Data Mapping as Search
In this paper, we describe and situate the TUPELO system for data mapping in relational databases. Automating the discovery of mappings between structured data sources is a long st...
George H. L. Fletcher, Catharine M. Wyss
124
Voted
SSDBM
2007
IEEE
124views Database» more  SSDBM 2007»
15 years 8 months ago
Incorporating Uncertainty Metrics into a General-Purpose Data Integration System
There is a significant need for data integration capabilities in the scientific domain, which has manifested itself as products in the commercial world as well as academia. Howeve...
Brenton Louie, Landon Detwiler, Nilesh N. Dalvi, R...
BMCBI
2010
138views more  BMCBI 2010»
15 years 2 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
CBMS
2004
IEEE
15 years 5 months ago
Toward a Systems Biology Software Toolkit
Insight to complex problems may be revealed when domain data sets are viewed or structured in new and innovative ways. Systems approaches to biomedical problems fundamentally invo...
Donald J. Johann, Michael D. McGuigan, Stanimire T...
BMCBI
2006
184views more  BMCBI 2006»
15 years 1 months ago
PathSys: integrating molecular interaction graphs for systems biology
Background: The goal of information integration in systems biology is to combine information from a number of databases and data sets, which are obtained from both high and low th...
Michael Baitaluk, Xufei Qian, Shubhada Godbole, Al...