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» A Data Transformation System for Biological Data Sources
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140
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BMCBI
2010
126views more  BMCBI 2010»
14 years 11 months ago
Systematic integration of experimental data and models in systems biology
Background: The behaviour of biological systems can be deduced from their mathematical models. However, multiple sources of data in diverse forms are required in the construction ...
Peter Li, Joseph O. Dada, Daniel Jameson, Irena Sp...
BMCBI
2010
115views more  BMCBI 2010»
15 years 2 months ago
Integration of multiple data sources to prioritize candidate genes using discounted rating system
Background: Identifying disease gene from a list of candidate genes is an important task in bioinformatics. The main strategy is to prioritize candidate genes based on their simil...
Yongjin Li, Jagdish Chandra Patra
BMCBI
2006
180views more  BMCBI 2006»
15 years 1 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
105
Voted
DOLAP
1999
ACM
15 years 6 months ago
Aggregation Everywhere: Data Reduction and Transformation in the Phoenix Data Warehouse
This paper describes the Phoenix system, which loads a data warehouse and then reports against it. Between the raw atomic data of the source system and the business measures prese...
Steven Tolkin
156
Voted
CSB
2005
IEEE
189views Bioinformatics» more  CSB 2005»
15 years 7 months ago
Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks
We developed a machine learning system for determining gene functions from heterogeneous sources of data sets using a Weighted Naive Bayesian Network (WNB). The knowledge of gene ...
Xutao Deng, Huimin Geng, Hesham H. Ali