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ICPADS
2006
IEEE
15 years 9 months ago
Parallel Leap: Large-Scale Maximal Pattern Mining in a Distributed Environment
When computationally feasible, mining extremely large databases produces tremendously large numbers of frequent patterns. In many cases, it is impractical to mine those datasets d...
Mohammad El-Hajj, Osmar R. Zaïane
ICPADS
2008
IEEE
15 years 10 months ago
Parallel Large Scale Inference of Protein Domain Families
The resolution of combinatorial assortments of protein sequences into domains is a prerequisite for protein sequence interpretation. However the recognition and clustering of homo...
Daniel Kahn, Clément Rezvoy, Fréd&ea...
GIS
2008
ACM
16 years 4 months ago
Finding regional co-location patterns for sets of continuous variables in spatial datasets
This paper proposes a novel framework for mining regional colocation patterns with respect to sets of continuous variables in spatial datasets. The goal is to identify regions in ...
Christoph F. Eick, Jean-Philippe Nicot, Rachana Pa...
BMCBI
2006
114views more  BMCBI 2006»
15 years 3 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
BMCBI
2008
111views more  BMCBI 2008»
15 years 3 months ago
VisualRepbase: an interface for the study of occurrences of transposable element families
Background: Repbase is a reference database of eukaryotic repetitive DNA, which includes prototypic sequences of repeats and basic information described in annotations. Repbase al...
Sébastien Tempel, Matthew Jurka, Jerzy Jurk...