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BMCBI
2011
14 years 4 months ago
N-gram analysis of 970 microbial organisms reveals presence of biological language models
Background: It has been suggested previously that genome and proteome sequences show characteristics typical of natural-language texts such as “signature-style” word usage ind...
Hatice U. Osmanbeyoglu, Madhavi Ganapathiraju
BMCBI
2011
14 years 4 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
BMCBI
2011
14 years 4 months ago
easyDAS: Automatic creation of DAS servers
Background: The Distributed Annotation System (DAS) has proven to be a successful way to publish and share biological data. Although there are more than 750 active registered serv...
Bernat Gel, Andrew M. Jenkinson, Rafael C. Jimenez...
CORR
2011
Springer
243views Education» more  CORR 2011»
14 years 4 months ago
Deterministic Network Model Revisited: An Algebraic Network Coding Approach
Abstract—The capacity of multiuser networks has been a longstanding problem in information theory. Recently, Avestimehr et al. have proposed a deterministic network model to appr...
MinJi Kim, Elona Erez, Edmund M. Yeh, Muriel M&eac...
CORR
2010
Springer
121views Education» more  CORR 2010»
14 years 4 months ago
Deep Self-Taught Learning for Handwritten Character Recognition
Recent theoretical and empirical work in statistical machine learning has demonstrated the importance of learning algorithms for deep architectures, i.e., function classes obtaine...
Frédéric Bastien, Yoshua Bengio, Arn...
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