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104
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BMCBI
2010
82views more  BMCBI 2010»
15 years 26 days ago
Predicting the network of substrate-enzyme-product triads by combining compound similarity and functional domain composition
Background: Metabolic pathway is a highly regulated network consisting of many metabolic reactions involving substrates, enzymes, and products, where substrates can be transformed...
Lei Chen, Kai-Yan Feng, Yu-Dong Cai, Kuo-Chen Chou...
102
Voted
BMCBI
2008
114views more  BMCBI 2008»
15 years 26 days ago
WSPMaker: a web tool for calculating selection pressure in proteins and domains using window-sliding
Background: In the study of adaptive evolution, it is important to detect the protein coding sites where natural selection is acting. In general, the ratio of the rate of non-syno...
Yong Seok Lee, Tae-Hyung Kim, Tae-Wook Kang, Won-H...
COLING
2010
14 years 7 months ago
Composition of Semantic Relations: Model and Applications
This paper presents a framework for combining semantic relations extracted from text to reveal even more semantics that otherwise would be missed. A set of 26 relations is introdu...
Eduardo Blanco 0002, Hakki C. Cankaya, Dan I. Mold...
101
Voted
CSREAEEE
2006
145views Business» more  CSREAEEE 2006»
15 years 2 months ago
e-Business Systems: Exploring Knowledge Prospect Domains (KPDs)
Research was conducted in the area of sustainable knowledge extraction from e-business systems and technologies. Differentiating approaches from three notable authors in the field...
Daniel Botha
BMCBI
2005
149views more  BMCBI 2005»
15 years 19 days ago
The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional pre
Background: The PD-(D/E)XK nuclease superfamily, initially identified in type II restriction endonucleases and later in many enzymes involved in DNA recombination and repair, is o...
Jan Kosinski, Marcin Feder, Janusz M. Bujnicki