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POPL
2006
ACM
16 years 4 months ago
Autolocker: synchronization inference for atomic sections
The movement to multi-core processors increases the need for simpler, more robust parallel programming models. Atomic sections have been widely recognized for their ease of use. T...
Bill McCloskey, Feng Zhou, David Gay, Eric A. Brew...
RECOMB
2008
Springer
16 years 4 months ago
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins
Abstract. In engineering protein variants by constructing and screening combinatorial libraries of chimeric proteins, two complementary and competing goals are desired: the new pro...
Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg
147
Voted
RECOMB
2004
Springer
16 years 4 months ago
Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
Manuel Middendorf, Anshul Kundaje, Chris Wiggins, ...
STOC
2006
ACM
138views Algorithms» more  STOC 2006»
16 years 4 months ago
The PCP theorem by gap amplification
The PCP theorem [3, 2] says that every language in NP has a witness format that can be checked probabilistically by reading only a constant number of bits from the proof. The cele...
Irit Dinur
139
Voted
ICALP
2009
Springer
16 years 4 months ago
External Sampling
We initiate the study of sublinear-time algorithms in the external memory model [14]. In this model, the data is stored in blocks of a certain size B, and the algorithm is charged...
Alexandr Andoni, Piotr Indyk, Krzysztof Onak, Roni...
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