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152
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BMCBI
2010
15 years 3 months ago
2010
Background: Modelling the ligand binding site of a protein is an important component of understanding proteinligand interactions and is being actively studied. Even if the side ch...
149
Voted
BMCBI
2008
15 years 3 months ago
2008
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
150
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BMCBI
2004
15 years 3 months ago
2004
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
145
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BMCBI
2004
15 years 3 months ago
2004
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
148
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PODC
2004
ACM
15 years 9 months ago
2004
ACM
We analyze the properties of Small-World networks, where links are much more likely to connect “neighbor nodes” than distant nodes. In particular, our analysis provides new re...