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EUROGP
2006
Springer
136views Optimization» more  EUROGP 2006»
13 years 10 months ago
Using Subtree Crossover Distance to Investigate Genetic Programming Dynamics
Abstract. To analyse various properties of the search process of genetic programming it is useful to quantify the distance between two individuals. Using operator-based distance me...
Leonardo Vanneschi, Steven Gustafson, Giancarlo Ma...
CEC
2007
IEEE
13 years 8 months ago
Fitness inheritance in evolutionary and multi-objective high-level synthesis
Abstract—The high-level synthesis process allows the automatic design and implementation of digital circuits starting from a behavioral description. Evolutionary algorithms are v...
Christian Pilato, Gianluca Palermo, Antonino Tumeo...
ESA
2008
Springer
106views Algorithms» more  ESA 2008»
13 years 8 months ago
An Experimental Analysis of Robinson-Foulds Distance Matrix Algorithms
In this paper, we study two fast algorithms--HashRF and PGM-Hashed--for computing the Robinson-Foulds (RF) distance matrix between a collection of evolutionary trees. The RF distan...
Seung-Jin Sul, Tiffani L. Williams
BIBM
2008
IEEE
134views Bioinformatics» more  BIBM 2008»
14 years 22 days ago
New Approaches to Compare Phylogenetic Search Heuristics
We present new and novel insights into the behavior of two maximum parsimony heuristics for building evolutionary trees of different sizes. First, our results show that the heuris...
Seung-Jin Sul, Suzanne Matthews, Tiffani L. Willia...
CSB
2005
IEEE
182views Bioinformatics» more  CSB 2005»
13 years 12 months ago
Bacterial Whole Genome Phylogeny Using Proteome Comparison and Optimal Reversal Distance
Traditional phylogenetic tree reconstruction is based on point mutations of a single gene. This approach is hardly suitable for genomes whose genes are almost identical and hardly...
Noppadon Khiripet