212 search results - page 23 / 43 » A Flexible Algorithm for Pairwise Protein Structure Alignmen... |
134
Voted
WABI
2001
Springer
15 years 8 months ago
2001
Springer
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
138
Voted
BMCBI
2005
15 years 3 months ago
2005
Background: The inference of homology from statistically significant sequence similarity is a central issue in sequence alignments. So far the statistical distribution function un...
89
Voted
ISMB
1996
15 years 4 months ago
1996
Thispaperintroducesa methodfor identifyingempirically conservedaminoacid substitution groups.In contrast with existing approachesthat viewaminoacid substitution as a pairwisepheno...
145
Voted
BMCBI
2008
15 years 3 months ago
2008
Background: The prediction of protein structure can be facilitated by the use of constraints based on a knowledge of functional sites. Without this information it is still possibl...
177
Voted
BMCBI
2002
15 years 3 months ago
2002
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...