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» A Framework for Modeling DNA Based Molecular Systems
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BIBE
2007
IEEE
149views Bioinformatics» more  BIBE 2007»
15 years 1 months ago
XML Encoding of Features Describing Rule-Based Modeling of Reaction Networks with Multi-Component Molecular Complexes
Multi-state molecules and multi-component complexes are commonly involved in cellular signaling. Accounting for molecules that have multiple potential states, such as a protein tha...
Michael L. Blinov, Ion I. Moraru
ACRI
2008
Springer
15 years 3 months ago
Automatic Design of FPGA Processor for the Backtracking of DNA Sequences Evolution Using Cellular Automata and Genetic Algorithm
In several cases, the DNA sequences of an organism are available in different stages of its evolution and it is desirable to reconstruct the DNA sequence in a previous evolution st...
Georgios Ch. Sirakoulis
BMCBI
2005
99views more  BMCBI 2005»
14 years 9 months ago
CGH-Profiler: Data mining based on genomic aberration profiles
Background: CGH-Profiler is a program that supports the analysis of genomic aberrations measured by Comparative Genomic Hybridisation (CGH). Comparative genomic hybridisation (CGH...
Falk Schubert, Bernhard Tausch, Stefan Joos, Rolan...
IDA
2008
Springer
14 years 9 months ago
ExpertDiscovery system application for the hierarchical analysis of eukaryotic transcription regulatory regions based on DNA cod
We developed Relational Data Mining approach which allows to overcome essential limitations of the Data Mining and Knowledge Discovery techniques. In the paper the approach was im...
I. V. Khomicheva, Eugenii E. Vityaev, Elena A. Ana...
ICSE
2012
IEEE-ACM
12 years 11 months ago
Engineering and verifying requirements for programmable self-assembling nanomachines
—We propose an extension of van Lamsweerde’s goal-oriented requirements engineering to the domain of programmable DNA nanotechnology. This is a domain in which individual devic...
Robyn R. Lutz, Jack H. Lutz, James I. Lathrop, Tit...