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» A Functional Model for Data Analysis
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BMCBI
2010
125views more  BMCBI 2010»
14 years 8 months ago
ProbFAST: Probabilistic Functional Analysis System Tool
Background: The post-genomic era has brought new challenges regarding the understanding of the organization and function of the human genome. Many of these challenges are centered...
Israel T. da Silva, Ricardo Z. N. Vêncio, Th...
BMCBI
2005
125views more  BMCBI 2005»
15 years 1 months ago
Query3d: a new method for high-throughput analysis of functional residues in protein structures
Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
BMCBI
2007
135views more  BMCBI 2007»
15 years 1 months ago
DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput
Background: Due to the complex and distributed nature of biological research, our current biological knowledge is spread over many redundant annotation databases maintained by man...
Brad T. Sherman, Da Wei Huang, Qina Tan, Yongjian ...
FOIKS
2010
Springer
15 years 4 months ago
On the Existence of Armstrong Data Trees for XML Functional Dependencies
Armstrong databases are a popular tool in example-based database design. An Armstrong database for a given constraint set from a fixed constraint class Z satisfies precisely those ...
Sven Hartmann, Henning Köhler, Thu Trinh
BIBM
2008
IEEE
175views Bioinformatics» more  BIBM 2008»
15 years 8 months ago
Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources
We propose a novel approach for predicting protein functions of an organism by coupling sequence homology and PPI data between two (or more) species with multifunctional Gene Onto...
Antonina Mitrofanova, Vladimir Pavlovic, Bud Mishr...