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» A Functional Ontology of Observation and Measurement
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ECML
2007
Springer
15 years 5 months ago
Conceptual Clustering Applied to Ontologies
Abstract. A clustering method is presented which can be applied to semantically annotated resources in the context of ontological knowledge bases. This method can be used to discov...
Floriana Esposito, Nicola Fanizzi, Claudia d'Amato
BMCBI
2010
178views more  BMCBI 2010»
14 years 11 months ago
An improved method for scoring protein-protein interactions using semantic similarity within the Gene Ontology
Background: Semantic similarity measures are useful to assess the physiological relevance of protein-protein interactions (PPIs). They quantify similarity between proteins based o...
Shobhit Jain, Gary D. Bader
ICASSP
2008
IEEE
15 years 6 months ago
Probabilistic framework for gene expression clustering validation based on gene ontology and graph theory
Based on the correlation between expression and ontologydriven gene similarity, we incorporate functional annotations into gene expression clustering validation. A probabilistic f...
Yinyin Yuan, Chang-Tsun Li
71
Voted
IJCNN
2006
IEEE
15 years 5 months ago
Kernel Based Functional Gene Grouping
Abstract— During the last years, high throughput experiments have become very popular. During the analysis of such data the need for a functional grouping of genes arises. In thi...
Holger Fröhlich, Nora Speer, Christian Spieth...
107
Voted
BMCBI
2004
114views more  BMCBI 2004»
14 years 11 months ago
Extending the mutual information measure to rank inferred literature relationships
Background: Within the peer-reviewed literature, associations between two things are not always recognized until commonalities between them become apparent. These commonalities ca...
Jonathan D. Wren