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» A Functional Ontology of Observation and Measurement
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COMCOM
2006
94views more  COMCOM 2006»
14 years 11 months ago
Estimation of network distances using off-line measurements
Several emerging large-scale Internet applications such as Content Distribution Networks, and Peerto-Peer networks could potentially benefit from knowing the underlying Internet t...
Prasun Sinha, Danny Raz, Nidhan Choudhuri
BMCBI
2006
169views more  BMCBI 2006»
14 years 11 months ago
Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction
Background: The accomplishment of the various genome sequencing projects resulted in accumulation of massive amount of gene sequence information. This calls for a large-scale comp...
Zhengdeng Lei, Yang Dai
102
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BMCBI
2008
111views more  BMCBI 2008»
14 years 12 months ago
Information-based methods for predicting gene function from systematic gene knock-downs
Background: The rapid annotation of genes on a genome-wide scale is now possible for several organisms using high-throughput RNA interference assays to knock down the expression o...
Matthew T. Weirauch, Christopher K. Wong, Alexandr...
SLOGICA
2008
85views more  SLOGICA 2008»
14 years 11 months ago
A Note on Prototypes, Convexity and Fuzzy Sets
The work on prototypes in ontologies pioneered by Rosch [10] and elaborated by Lakoff [8] and Freund [3] is related to vagueness in the sense that the more remote an instance is fr...
Norman Foo, Boon Toh Low
BMCBI
2011
14 years 6 months ago
Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community
Background: Caenorhabditis elegans gene-based phenotype information dates back to the 1970’s, beginning with Sydney Brenner and the characterization of behavioral and morphologi...
Gary Schindelman, Jolene Fernandes, Carol Bastiani...