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112
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BMCBI
2007
136views more  BMCBI 2007»
15 years 1 months ago
Genomorama: genome visualization and analysis
Background: The ability to visualize genomic features and design experimental assays that can target specific regions of a genome is essential for modern biology. To assist in the...
Jason D. Gans, Murray Wolinsky
120
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BMCBI
2010
189views more  BMCBI 2010»
15 years 1 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
130
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CORR
2010
Springer
208views Education» more  CORR 2010»
15 years 1 months ago
Bounded Model Checking of Multi-threaded Software using SMT solvers
The transition from single-core to multi-core processors has made multi-threaded software an important subject in computer aided verification. Here, we describe and evaluate an ex...
Lucas Cordeiro, Bernd Fischer 0002
119
Voted
CORR
2010
Springer
210views Education» more  CORR 2010»
15 years 1 months ago
Exploiting Statistical Dependencies in Sparse Representations for Signal Recovery
Signal modeling lies at the core of numerous signal and image processing applications. A recent approach that has drawn considerable attention is sparse representation modeling, in...
Tomer Faktor, Yonina C. Eldar, Michael Elad
109
Voted
BMCBI
2006
99views more  BMCBI 2006»
15 years 1 months ago
Genetic algorithm learning as a robust approach to RNA editing site prediction
Background: RNA editing is one of several post-transcriptional modifications that may contribute to organismal complexity in the face of limited gene complement in a genome. One f...
James Thompson, Shuba Gopal