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» A General Framework for Large Scale Systems Development
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BMCBI
2007
145views more  BMCBI 2007»
14 years 12 months ago
BioPP: a tool for web-publication of biological networks
Background: Cellular processes depend on the function of intracellular molecular networks. The curation of the literature relevant to specific biological pathways is important for...
Ganesh A. Viswanathan, German Nudelman, Sonali Pat...
CONCURRENCY
2010
130views more  CONCURRENCY 2010»
14 years 12 months ago
Enabling high-speed asynchronous data extraction and transfer using DART
As the complexity and scale of current scientific and engineering applications grow, managing and transporting the large amounts of data they generate is quickly becoming a signif...
Ciprian Docan, Manish Parashar, Scott Klasky
BMCBI
2004
162views more  BMCBI 2004»
14 years 11 months ago
Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant m
Background: Modern developmental biology relies heavily on the analysis of embryonic gene expression patterns. Investigators manually inspect hundreds or thousands of expression p...
Rajalakshmi Gurunathan, Bernard Van Emden, Sethura...
SAC
2009
ACM
15 years 6 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
ENVSOFT
2006
131views more  ENVSOFT 2006»
14 years 12 months ago
Hydrological models are so good, do we still need data?
Our ability to numerically model natural systems has progressed enormously over the last 10e20 years. During the last decade computational power has increased to the stage where w...
R. P. Silberstein