Sciweavers

6719 search results - page 204 / 1344
» A Generalization of Automatic Sequences
Sort
View
90
Voted
BMCBI
2007
115views more  BMCBI 2007»
15 years 28 days ago
Comparing sequences without using alignments: application to HIV/SIV subtyping
Background: In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for inst...
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Z...
113
Voted
BMCBI
2005
97views more  BMCBI 2005»
15 years 22 days ago
Evolutionary distance estimation and fidelity of pair wise sequence alignment
Background: Evolutionary distances are a critical measure in comparative genomics and molecular evolutionary biology. A simulation study was used to examine the effect of alignmen...
Michael S. Rosenberg
97
Voted
RECOMB
1997
Springer
15 years 5 months ago
A branch-and-cut algorithm for multiple sequence alignment
Multiple sequence alignment is an important problem in computational biology. We study the Maximum Trace formulation introduced by Kececioglu [?]. We first phrase the problem in ...
Knut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kur...
90
Voted
CORR
2010
Springer
95views Education» more  CORR 2010»
15 years 28 days ago
Performance evaluation for ML sequence detection in ISI channels with Gauss Markov Noise
Inter-symbol interference (ISI) channels with data dependent Gauss Markov noise have been used to model read channels in magnetic recording and other data storage systems. The Vite...
Naveen Kumar, Aditya Ramamoorthy, Murti V. Salapak...
106
Voted
BMCBI
2005
158views more  BMCBI 2005»
15 years 22 days ago
Automated generation of heuristics for biological sequence comparison
Background: Exhaustive methods of sequence alignment are accurate but slow, whereas heuristic approaches run quickly, but their complexity makes them more difficult to implement. ...
Guy St. C. Slater, Ewan Birney