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» A Geometric Representation of Protein Sequences
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NAR
2000
84views more  NAR 2000»
14 years 9 months ago
SRPDB (Signal Recognition Particle Database)
The Signal Recognition Particle Database (SRPDB) at http://psyche.uthct.edu/dbs/SRPDB/SRPDB.html and http://bio.lundberg.gu.se/dbs/SRPDB/SRPDB. html assists in the better understa...
Christian Zwieb, Tore Samuelsson
MAGS
2007
168views more  MAGS 2007»
14 years 9 months ago
Agent-based protein structure prediction
A protein is identified by a finite sequence of amino acids, each of them chosen from a set of 20 elements. The Protein Structure Prediction Problem is the problem of predicting...
Luca Bortolussi, Agostino Dovier, Federico Fogolar...
69
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GECCO
2005
Springer
124views Optimization» more  GECCO 2005»
15 years 3 months ago
The evolutionary computation approach to motif discovery in biological sequences
Finding motifs — patterns of conserved residues — within nucleotide and protein sequences is a key part of understanding function and regulation within biological systems. Thi...
Michael A. Lones, Andrew M. Tyrrell
SGP
2003
14 years 11 months ago
A geometric database for gene expression data
As the logical next step after sequencing the mouse genome, biologists have developed laboratory methods for rapidly determining where each of the 30K genes in the mouse genome is...
Joe D. Warren, Tao Ju, Gregor Eichele, Christina T...
BIBE
2005
IEEE
14 years 11 months ago
A Multi-Level Approach to SCOP Fold Recognition
The classification of proteins based on their structure can play an important role in the deduction or discovery of protein function. However, the relatively low number of solved...
Keith Marsolo, Srinivasan Parthasarathy, Chris H. ...