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» A Geometric Representation of Protein Sequences
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COMPGEOM
2005
ACM
14 years 11 months ago
Dynamic maintenance of molecular surfaces under conformational changes
We present an efficient algorithm for maintaining the boundary and surface area of protein molecules as they undergo conformational changes. We also describe a robust implementati...
Eran Eyal, Dan Halperin
BIRD
2007
Springer
117views Bioinformatics» more  BIRD 2007»
15 years 3 months ago
Enhancing Protein Disorder Detection by Refined Secondary Structure Prediction
More and more proteins have been observed to display functions through intrinsic disorder. Such structurally flexible regions are shown to play important roles in biological proces...
Chung-Tsai Su, Tong-Ming Hsu, Chien-Yu Chen, Yu-Ye...
FGR
2008
IEEE
203views Biometrics» more  FGR 2008»
15 years 4 months ago
Spatiotemporal pyramid representation for recognition of facial expressions and hand gestures
This paper presents a spatiotemporal pyramid representation for recognizing facial expressions and hand gestures. This approach works by partitioning video sequence into increasin...
Zhipeng Zhao, Ahmed M. Elgammal
BMCBI
2006
114views more  BMCBI 2006»
14 years 9 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
DASFAA
2005
IEEE
209views Database» more  DASFAA 2005»
15 years 3 months ago
PADS: Protein Structure Alignment Using Directional Shape Signatures
A novel approach for similarity search on the protein structure databases is proposed. PADS (Protein Alignment by Directional shape Signatures) incorporates the three dimensional ...
S. Alireza Aghili, Divyakant Agrawal, Amr El Abbad...