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» A Geometric Representation of Protein Sequences
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BMCBI
2007
142views more  BMCBI 2007»
14 years 9 months ago
SABERTOOTH: protein structural alignment based on a vectorial structure representation
Background: The task of computing highly accurate structural alignments of proteins in very short computation time is still challenging. This is partly due to the complexity of pr...
Florian Teichert, Ugo Bastolla, Markus Porto
BMCBI
2010
97views more  BMCBI 2010»
14 years 9 months ago
SeqRate: sequence-based protein folding type classification and rates prediction
Background: Protein folding rate is an important property of a protein. Predicting protein folding rate is useful for understanding protein folding process and guiding protein des...
Guan Ning Lin, Zheng Wang, Dong Xu, Jianlin Cheng
FBIT
2007
IEEE
15 years 3 months ago
Classification of Cell Membrane Proteins
Membrane proteins are an important class of proteins that serve as channels, receptors, and energy transducers in a cell membrane. Knowledge of a given type of cell membrane prote...
Seyed Koosha Golmohammadi, Lukasz A. Kurgan, Brend...
ISMB
1993
14 years 11 months ago
Representation for Discovery of Protein Motifs
There are several dimensions and levels of complexity in which information on protein motifs may be available. For example, onedimensional sequence motifs may be associated with s...
Darrell Conklin, Suzanne Fortier, Janice I. Glasgo...
ICIP
2002
IEEE
15 years 11 months ago
Retrieval of 3D protein structures
A protein molecule is made of a long chain of amino acid sequences that fold into a complex three-dimensional structure. It is often the geometrical shapes that determine the prot...
Shann-Ching Chen, Tsuhan Chen