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» A Grid-Oriented Genetic Algorithm
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RECOMB
2004
Springer
16 years 5 months ago
Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
Manuel Middendorf, Anshul Kundaje, Chris Wiggins, ...
TCBB
2008
117views more  TCBB 2008»
15 years 5 months ago
Consensus Genetic Maps as Median Orders from Inconsistent Sources
A genetic map is an ordering of genetic markers calculated from a population of known lineage. Although, traditionally, a map has been generated from a single population for each s...
Benjamin G. Jackson, Patrick S. Schnable, Srinivas...
ATAL
2003
Springer
15 years 10 months ago
Designing Self-Assembly for 2-Dimensional Building Blocks
In this paper we present a genetic algorithm-based approach towards designing self-assembling objects comprised of square smart blocks. Each edge of each block can have one of thr...
Ying Guo, Geoff Poulton, Philip Valencia, Geoff Ja...
GECCO
2004
Springer
137views Optimization» more  GECCO 2004»
15 years 10 months ago
Evolving Better Multiple Sequence Alignments
Aligning multiple DNA or protein sequences is a fundamental step in the analyses of phylogeny, homology and molecular structure. Heuristic algorithms are applied because optimal mu...
Luke Sheneman, James A. Foster
TSMC
2008
100views more  TSMC 2008»
15 years 5 months ago
Instruction-Matrix-Based Genetic Programming
In genetic programming (GP), evolving tree nodes separately would reduce the huge solution space. However, tree nodes are highly interdependent with respect to their fitness. In th...
Gang Li, Jin Feng Wang, Kin-Hong Lee, Kwong-Sak Le...