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» A Kernel Approach to Comparing Distributions
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GIS
2008
ACM
15 years 17 days ago
Automatic extraction of road intersection position, connectivity, and orientations from raster maps
The road network is one of the most important types of information on raster maps. In particular, the set of road intersection templates, which consists of the road intersection p...
Yao-Yi Chiang, Craig A. Knoblock
BMCBI
2008
103views more  BMCBI 2008»
14 years 11 months ago
Parameter estimation for robust HMM analysis of ChIP-chip data
Background: Tiling arrays are an important tool for the study of transcriptional activity, proteinDNA interactions and chromatin structure on a genome-wide scale at high resolutio...
Peter Humburg, David Bulger, Glenn Stone
BMCBI
2006
137views more  BMCBI 2006»
14 years 11 months ago
Bounded search for de novo identification of degenerate cis-regulatory elements
Background: The identification of statistically overrepresented sequences in the upstream regions of coregulated genes should theoretically permit the identification of potential ...
Jonathan M. Carlson, Arijit Chakravarty, Radhika S...
JCB
2006
140views more  JCB 2006»
14 years 11 months ago
HAPLOFREQ-Estimating Haplotype Frequencies Efficiently
A commonly used tool in disease association studies is the search for discrepancies between the haplotype distribution in the case and control populations. In order to find this d...
Eran Halperin, Elad Hazan
BMCBI
2010
81views more  BMCBI 2010»
14 years 11 months ago
Empirical Bayes Analysis of Sequencing-based Transcriptional Profiling without Replicates
Background: Recent technological advancements have made high throughput sequencing an increasingly popular approach for transcriptome analysis. Advantages of sequencing-based tran...
Zhijin Wu, Bethany D. Jenkins, Tatiana A. Rynearso...