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BMCBI
2008
116views more  BMCBI 2008»
14 years 11 months ago
IgTM: An algorithm to predict transmembrane domains and topology in proteins
Background: Due to their role of receptors or transporters, membrane proteins play a key role in many important biological functions. In our work we used Grammatical Inference (GI...
Piedachu Peris, Damián López, Marcel...
BMCBI
2008
175views more  BMCBI 2008»
14 years 11 months ago
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces
Background: Protein-protein interactions are ubiquitous and essential for all cellular processes. High-resolution X-ray crystallographic structures of protein complexes can reveal...
Andrew J. Bordner, Andrey A. Gorin
BMCBI
2008
143views more  BMCBI 2008»
14 years 11 months ago
Automatic detection of exonic splicing enhancers (ESEs) using SVMs
Background: Exonic splicing enhancers (ESEs) activate nearby splice sites and promote the inclusion (vs. exclusion) of exons in which they reside, while being a binding site for S...
Britta Mersch, Alexander Gepperth, Sándor S...
SIGMOD
2008
ACM
139views Database» more  SIGMOD 2008»
15 years 12 months ago
Paths to stardom: calibrating the potential of a peer-based data management system
As peer-to-peer (P2P) networks become more familiar to the database community, intense interest has built up in using their scalability and resilience properties to scale database...
Mihai Lupu, Beng Chin Ooi, Y. C. Tay
KDD
2009
ACM
228views Data Mining» more  KDD 2009»
16 years 7 days ago
A generalized Co-HITS algorithm and its application to bipartite graphs
Recently many data types arising from data mining and Web search applications can be modeled as bipartite graphs. Examples include queries and URLs in query logs, and authors and ...
Hongbo Deng, Michael R. Lyu, Irwin King