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BMCBI
2005
150views more  BMCBI 2005»
14 years 9 months ago
Discover protein sequence signatures from protein-protein interaction data
Background: The development of high-throughput technologies such as yeast two-hybrid systems and mass spectrometry technologies has made it possible to generate large protein-prot...
Jianwen Fang, Ryan J. Haasl, Yinghua Dong, Gerald ...
BMCBI
2005
187views more  BMCBI 2005»
14 years 9 months ago
JAtlasView: a Java atlas-viewer for browsing biomedical 3D images and atlases
Background: Many three-dimensional (3D) images are routinely collected in biomedical research and a number of digital atlases with associated anatomical and other information have...
Guangjie Feng, Nick Burton, Bill Hill, Duncan Davi...
BMCBI
2005
89views more  BMCBI 2005»
14 years 9 months ago
An empirical analysis of training protocols for probabilistic gene finders
Background: Generalized hidden Markov models (GHMMs) appear to be approaching acceptance as a de facto standard for state-of-the-art ab initio gene finding, as evidenced by the re...
William H. Majoros, Steven Salzberg
BMCBI
2005
116views more  BMCBI 2005»
14 years 9 months ago
Dynamic covariation between gene expression and proteome characteristics
Background: Cells react to changing intra- and extracellular signals by dynamically modulating complex biochemical networks. Cellular responses to extracellular signals lead to ch...
Mansour Taghavi Azar Sharabiani, Markku Siermala, ...
BMCBI
2005
107views more  BMCBI 2005»
14 years 9 months ago
Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multip
Background: Predicting the subcellular localization of proteins is important for determining the function of proteins. Previous works focused on predicting protein localization in...
Jiren Wang, Wing-Kin Sung, Arun Krishnan, Kuo-Bin ...
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