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» A Mechanization of Phylogenetic Trees
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VIROLOGY
2008
104views more  VIROLOGY 2008»
15 years 18 days ago
Malware behaviour analysis
Several malware analysis techniques suppose that the disassembled code of a piece of malware is available, which is however not always possible. This paper proposes a flexible and ...
Gérard Wagener, Radu State, Alexandre Dulau...
103
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RECOMB
2009
Springer
16 years 1 months ago
How Many Bootstrap Replicates Are Necessary?
Phylogenetic Bootstrapping (BS) is a standard technique for inferring confidence values on phylogenetic trees that is based on reconstructing many trees from minor variations of th...
Nicholas D. Pattengale, Masoud Alipour, Olaf R. P....
97
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BMCBI
2006
92views more  BMCBI 2006»
15 years 23 days ago
Recrafting the neighbor-joining method
Background: The neighbor-joining method by Saitou and Nei is a widely used method for constructing phylogenetic trees. The formulation of the method gives rise to a canonical (n3)...
Thomas Mailund, Gerth Stølting Brodal, Rolf...
BMCBI
2005
134views more  BMCBI 2005»
15 years 18 days ago
Ancestral sequence alignment under optimal conditions
Background: Multiple genome alignment is an important problem in bioinformatics. An important subproblem used by many multiple alignment approaches is that of aligning two multipl...
Alexander K. Hudek, Daniel G. Brown 0001
BMCBI
2010
135views more  BMCBI 2010»
15 years 25 days ago
GIGA: a simple, efficient algorithm for gene tree inference in the genomic age
Background: Phylogenetic relationships between genes are not only of theoretical interest: they enable us to learn about human genes through the experimental work on their relativ...
Paul D. Thomas