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» A Mechanization of Phylogenetic Trees
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BMCBI
2005
137views more  BMCBI 2005»
15 years 19 days ago
A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
Olivier Bastien, Philippe Ortet, Sylvaine Roy, Eri...
86
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ICCS
2004
Springer
15 years 6 months ago
ABSDM: Agent Based Service Discovery Mechanism in Internet
To improve popular services discovery mechanism (UDDI mainly), we propose an agent-based services discovery mechanism. In this mechanism, services information is stored in distribu...
Shijian Li, Congfu Xu, Zhaohui Wu, Yunhe Pan, Xuel...
115
Voted
ALENEX
2009
106views Algorithms» more  ALENEX 2009»
15 years 1 months ago
Drawing Binary Tanglegrams: An Experimental Evaluation
A tanglegram is a pair of trees whose leaf sets are in oneto-one correspondence; matching leaves are connected by inter-tree edges. In applications such as phylogenetics or hierar...
Martin Nöllenburg, Markus Völker, Alexan...
WABI
2004
Springer
15 years 6 months ago
Reconstructing Ancestral Gene Orders Using Conserved Intervals
Conserved intervals were recently introduced as a measure of similarity between genomes whose genes have been shuffled during evolution by genomic rearrangements. Phylogenetic reco...
Anne Bergeron, Mathieu Blanchette, Annie Chateau, ...
IJCBDD
2008
113views more  IJCBDD 2008»
15 years 22 days ago
Parsimony accelerated Maximum Likelihood searches
: Phylogenetic search is a key tool used in a variety of biological research endeavors. However, this search problem is known to be computationally difficult, due to the astronomic...
Kenneth Sundberg, Timothy O'Connor, Hyrum Carroll,...