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» A Mechanization of Phylogenetic Trees
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98
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BMCBI
2010
117views more  BMCBI 2010»
15 years 26 days ago
Using jackknife to assess the quality of gene order phylogenies
Background: In recent years, gene order data has attracted increasing attention from both biologists and computer scientists as a new type of data for phylogenetic analysis. If ge...
Jian Shi, Yiwei Zhang, Haiwei Luo, Jijun Tang
105
Voted
BMCBI
2007
144views more  BMCBI 2007»
15 years 23 days ago
Assessing the ability of sequence-based methods to provide functional insight within membrane integral proteins: a case study an
Background: Efforts to predict functional sites from globular proteins is increasingly common; however, the most successful of these methods generally require structural insight. ...
Dennis R. Livesay, Patrick D. Kidd, Sepehr Eskanda...
108
Voted
BMCBI
2008
114views more  BMCBI 2008»
15 years 26 days ago
Visualization of large influenza virus sequence datasets using adaptively aggregated trees with sampling-based subscale represen
Background: With the amount of influenza genome sequence data growing rapidly, researchers need machine assistance in selecting datasets and exploring the data. Enhanced visualiza...
Leonid Zaslavsky, Yiming Bao, Tatiana A. Tatusova
JACM
2006
99views more  JACM 2006»
15 years 22 days ago
Finding a maximum likelihood tree is hard
Abstract. Maximum likelihood (ML) is an increasingly popular optimality criterion for selecting evolutionary trees [Felsenstein 1981]. Finding optimal ML trees appears to be a very...
Benny Chor, Tamir Tuller
153
Voted
CORR
2011
Springer
235views Education» more  CORR 2011»
14 years 7 months ago
On the accuracy of language trees
Historical linguistics aims at inferring the most likely language phylogenetic tree starting from information concerning the evolutionary relatedness of languages. The available i...
Simone Pompei, Vittorio Loreto, Francesca Tria