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» A Model of Computation for MapReduce
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ISMB
1993
15 years 2 months ago
Prediction of Primate Splice Junction Gene Sequences with a Cooperative Knowledge Acquisition System
Wepropose a cooperative conceptual modelling environment in which two agents interact : the machineand the humanexpert. Theformer is able to extract knowledge from data using a sy...
Engelbert Mephu Nguifo, Jean Sallantin
ISMB
1996
15 years 2 months ago
A Grammar-Based Unification of Several Alignment and Folding Algorithms
Weshowin this paper that manypopular models of folding and/or alignment maybe described by a new formalism: multi-tape S-attribute grammars(MTSAG's).This formalism relieves t...
Fabrice Lefebvre
ISMB
1993
15 years 2 months ago
Grammatical Formalization of Metabolic Processes
In the field of biotechnologyand medicineit is of interest to modeland simulate metabolicprocesses. The usual methods to model metabolic pathwaysare chemicaldescriptions anddiffer...
Ralf Hofestädt
ISMB
2000
15 years 2 months ago
A Probabilistic Learning Approach to Whole-Genome Operon Prediction
We present a computational approach to predicting operons in the genomes of prokaryotic organisms. Our approach uses machine learning methods to induce predictive models for this ...
Mark Craven, David Page, Jude W. Shavlik, Joseph B...
ISMB
1996
15 years 2 months ago
The Megaprior Heuristic for Discovering Protein Sequence Patterns
Several computeralgorithms for discovering patterns in groups of protein sequences are in use that are basedon fitting the parametersof a statistical model to a group of related s...
Timothy L. Bailey, Michael Gribskov