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BMCBI
2010
177views more  BMCBI 2010»
15 years 3 months ago
Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
Background: Phylogenetic analysis can be used to divide a protein family into subfamilies in the absence of experimental information. Most phylogenetic analysis methods utilize mu...
Aydin Albayrak, Hasan H. Otu, Ugur O. Sezerman
BMCBI
2010
104views more  BMCBI 2010»
15 years 3 months ago
FragViz: visualization of fragmented networks
Background: Researchers in systems biology use network visualization to summarize the results of their analysis. Such networks often include unconnected components, which popular ...
Miha Stajdohar, Minca Mramor, Blaz Zupan, Janez De...
BMCBI
2010
187views more  BMCBI 2010»
15 years 3 months ago
PathEx: a novel multi factors based datasets selector web tool
Background: Microarray experiments have become very popular in life science research. However, if such experiments are only considered independently, the possibilities for analysi...
Eric Bareke, Michael Pierre, Anthoula Gaigneaux, B...
CORR
2010
Springer
130views Education» more  CORR 2010»
15 years 3 months ago
Phase Transitions for Greedy Sparse Approximation Algorithms
A major enterprise in compressed sensing and sparse approximation is the design and analysis of computationally tractable algorithms for recovering sparse, exact or approximate, s...
Jeffrey D. Blanchard, Coralia Cartis, Jared Tanner...
BMCBI
2007
114views more  BMCBI 2007»
15 years 3 months ago
Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome
Background: The structure annotation of a genome is based either on ab initio methodologies or on similaritiy searches versus molecules that have been already annotated. Ab initio...
Nunzio D'Agostino, Alessandra Traini, Luigi Frusci...